The outer membrane (OM) of Gram-negative bacteria is an asymmetric bilayer having phospholipids in the inner leaflet and lipopolysaccharides (LPS) in the outer leaflet. This unique asymmetry and the complex carbohydrates in LPS make it a daunting task to study the asymmetrical OM structure and dynamics, its interactions with outer membrane proteins, as well as its roles in translocation of substrates including antibiotics. In this study, we combine neutron reflectometry and molecular simulation to explore physical properties of OM mimetics.
http://bit.ly/2WLZIQ1
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- Physical Properties of Bacterial Outer Membrane Mo...
- Influenza A M2 Channel Clustering at High Protein ...
- Natural ceramides and lysophospholipids co-segrega...
- Revealing clonality and subclonality of driver gen...
- Astaxanthin supplementation modulates cognitive fu...
- Novel small molecule decreases cell proliferation,...
- The effect of fear of falling on prefrontal cortex...
- Serotonin levels and 1-year mortality in patients ...
- KEYNOTE-590: Phase III study of first-line chemoth...
- Analysis of Genetic Diversity and Population Struc...
- Bidirectional Selection for Body Weight on Standin...
- A Flexible Open-Source Decision Model for Value As...
- A T-cell-engaging B7-H4/CD3 bispecific Fab-scFv an...
- Comprehensive genetic characterization of human th...
- Patient, Doctor Communication Priorities Differ in...
- Johnson & Johnson to Provide Drug Prices in TV Ads
- Predictors of Kidney Stone Recurrence Identified
- Walgreens Worst Violator in Tobacco Sales to Minor...
- Measles Outbreak Triggers Sharp Rise in Demand for...
- Contents
- Elsewhere in The AGA Journals
- Neutrophil-to-Lymphocyte Ratio; an Independent Pre...
- No Maintenance, No Gain in Long-term Treatment of ...
- Editorial Board
- Cover
- Information for Authors and Readers
- Clostridium difficile
- Reply
- Issue Highlights
- Reply
- Reply
- Reply
- Functional Gastrointestinal Symptoms in Inflammato...
- Study Tests Targeted Drugs for Multiple Myeloma [N...
- Monophosphorylation Regulates Activities of RB dur...
- Pharmacologic Inhibition of STK19 Impairs NRAS-Dri...
- Ibrutinib plus Palbociclib Has Efficacy in Mantle ...
- Targeting the interplay between metabolism and epi...
- Editorial introductions
- Editorial: New Frontiers in Skin Cancer
- Mosaicism, aging and cancer
- Immune checkpoint blockade for organ transplant pa...
- p53, stem cell biology and childhood blastomas
- Sunbeds and melanoma risk: time to close the debate
- Post-transcriptional regulations of cancer stem ce...
- New perspectives in Merkel cell carcinoma
- Chordoma: update on disease, epidemiology, biology...
- A feasibility study of mediastinoscopic radical es...
- Don’t Smoke ‘em if you got ‘em—Tobacco Exposure In...
- Pancreatic cysts: Let’s start looking at the patie...
- Healthcare Utilization and Costs for Patients With...
- Colorectal Cancer in Individuals With Familial Ade...
- American ancestry is a risk factor for suspected n...
- Gastric Tumoral Melanosis: a Rare Manifestation of...
- Association Between Severe Serum Alanine Aminotran...
- Refractory perforated gastric ulcer after particle...
- Importance of tissue acquisition in gastric submuc...
- Anaplastic Lymphoma Kinase (ALK)-positive Tumors: ...
- Delays in palliative care referral among surgical ...
- Female Representation and Implicit Gender Bias at ...
- Announcements
- The Evidence Speaks for Itself
- Laparoscopic Mesorectal Excision in Obesity: Novel...
- Adjuvant Chemotherapy for Colon Cancer
- Consequences of Increasing Complexity in Anorectal...
- Expert Commentary on Adjuvant Chemotherapy for Col...
- Meta-analyses of Current Strategies to Treat Uncom...
- Robotic Transanal Minimally Invasive Surgery for t...
- A Team-Based Approach to Anal Cancer Screening and...
- Influence of Anastomotic Leak After Elective Color...
- Moving Beyond Representation as a Marker of Gender...
- Is the Pathologic Response of T3 Rectal Cancer to ...
- Medium- to Long-term Follow-up of Obstetric Anal S...
- Comparison of Anal Versus Rectal Staging in the Pr...
- System-Wide Improvement for Transitions After Ileo...
- Construct Validity and Responsiveness of the Abdom...
- Endoscopic Submucosal Dissection With Closure of C...
- Profile of Consecutive Fecal Calprotectin Levels i...
- Abridged Abstracts From the Medical Literature
- Factors Related to Health Informatics Competencies...
- Neutropenic Enterocolitis in Critically Ill Patien...
- Defining the Role Of Language in Infants' Object C...
- Functional Magnetic Resonance Spectroscopy at 7 T ...
- Quantitative Examination of Antibiotic Susceptibil...
- After Lung Cancer Screening, Follow-Up Procedures ...
- Using a Real-Time Locating System to Measure Walki...
- Using Ustilago maydis as a Trojan Horse for In Sit...
- EZH2 inhibitor GSK126 suppresses anti-tumor immuni...
- Tumor suppressor microRNA-204-5p regulates growth,...
- Upregulation of PD-L1 via HMGB1-activated IRF3 and...
- Epithelial-to-mesenchymal transition is a mechanis...
- Delayed EMS Response Time Tied to Mortality After ...
- Slower Gait Speed, Shorter Step Length Tied to Lat...
- Diagnostic Delays Common in Inflammatory Bowel Dis...
- Education Not Tied to Rate of Cognitive Change in ...
- Misuse of Rx Opioids Linked to Other High-Risk Beh...
- Vaccine-Preventable Infections Common After Peds T...
- Country-Specific Norms Created for Cancer-Related ...
- Certain Opioids Less Effective With SSRI Antidepre...
- High-Risk HPV Infection Linked to Increased Risk f...
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Αναζήτηση αυτού του ιστολογίου
Παρασκευή 8 Φεβρουαρίου 2019
Physical Properties of Bacterial Outer Membrane Models: Neutron Reflectometry & Molecular Simulation
Influenza A M2 Channel Clustering at High Protein to Lipid Ratios: Viral Budding Implications
Protein dynamics in crowded environments is important for understanding protein functions in vivo and is especially relevant for membrane proteins due to the roles of protein-protein interactions in membrane protein functions and their regulation. Here, using solid-state NMR spectroscopy in combination with coarse-grained molecular dynamics simulations, we report that the rotational correlation time for the transmembrane domain of the Influenza A M2 proton channel in lipid bilayers increases dramatically at an elevated protein-to-lipid ratio.
http://bit.ly/2RMLsTf
Natural ceramides and lysophospholipids co-segregate in fluid phosphatidylcholine bilayers
The mode of interactions between palmitoyl lysophosphatidycholine (palmitoyl lyso-PC), or other lysophospholipids (lyso-PLs), and palmitoyl ceramide (PCer), or other ceramide analogs, in dioleoylphosphatidylcholine (DOPC) bilayers has been examined. PCer is known to segregate laterally into a ceramide-rich phase at concentrations that depend on the nature of the ceramides and the co-phospholipids. In DOPC bilayers, PCer forms a ceramide-rich phase at concentrations above 10 mol%. In the presence of 20 mol% palmitoyl lyso-PC in the DOPC bilayer, the lateral segregation of PCer was markedly facilitated (segregation at lower PCer concentrations).
http://bit.ly/2RQegdt
Revealing clonality and subclonality of driver genes for clinical survival benefits in breast cancer
Abstract
Purpose
Genomic studies have revealed that genomic aberrations play important roles in the progression of this disease. The aim of this study was to evaluate the associations between clinical survival outcomes of the clonality and subclonality status of driver genes in breast cancer.
Methods
We performed an integrated analysis to infer the clonal status of 55 driver genes in breast cancer data from TCGA. We used the chi-squared test to assess the relations between clonality of driver gene mutations and clinicopathological factors. The Kaplan–Meier method was performed for the visualization and the differences between survival curves were calculated by log-rank test. Univariate and multivariate Cox proportional hazards regression models were used to adjust for clinicopathological factors.
Results
We identified a high proportion of clonal mutations in these driver genes. Among them, there were 17 genes showing significant associations between their clonality and multiple clinicopathologic factors. Performing survival analysis on BRCA patients with clonal or subclonal driver gene mutations, we found that clonal ERBB2, FOXA1, and KMT2C mutations and subclonal GATA3 and RB1 mutations predicted shorter overall survival compared with those with wild type. Furthermore, clonal ERBB2 and FOXA1 mutations and subclonal GATA3 and RB1 mutations independently predicted for shorter overall survival after adjusting for clinicopathological factors. By longitudinal analysis, the clonality of ERBB2, FOXA1, GATA3, and RB1 significantly predicted patients' outcome within some specific BRCA tumor stages and histological subtypes.
Conclusions
In summary, these clonal or subclonal mutations of driver genes have implications for diagnosis, prognosis, and treatment with BRCA patients.
http://bit.ly/2SJSGw5
Astaxanthin supplementation modulates cognitive function and synaptic plasticity in young and aged mice
Abstract
The incidence of neurodegenerative disorders and cognitive impairment is increasing. Rising prevalence of age-related medical conditions is associated with a dramatic economic burden; therefore, developing strategies to manage these health concerns is of great public health interest. Nutritionally based interventions have shown promise in treatment of these age-associated conditions. Astaxanthin is a carotenoid with reputed neuroprotective properties in the context of disease and injury, while emerging evidence suggests that astaxanthin may also have additional biological activities relating to neurogenesis and synaptic plasticity. Here, we investigate the potential for astaxanthin to modulate cognitive function and neural plasticity in young and aged mice. We show that feeding astaxanthin to aged mice for 1 month improves performance on several hippocampal-dependent cognitive tasks and increases long-term potentiation. However, we did not observe an alteration in neurogenesis, nor did we observe a change in microglial-associated IBA1 immunostaining. This demonstrates the potential for astaxanthin to modulate neural plasticity and cognitive function in aging.
http://bit.ly/2UKdXCQ
Novel small molecule decreases cell proliferation, migration, clone formation, and gene expression through ERK inhibition in MCF-7 and MDA-MB-231 breast cancer cell lines
http://bit.ly/2RS9vAt
The effect of fear of falling on prefrontal cortex activation and efficiency during walking in older adults
Abstract
Neural inefficiency is inferred when higher brain activations are associated with similar or worse performance. Improved neural efficiency is achieved when task-related brain activations are reduced after practice. No information is available on the effect of fear-of-falling (FOF) on brain activation during walking. We hypothesized that the presence of FOF would be associated with neural inefficiency and with a delay in improving neural efficiency during dual-task walking. Task conditions included single-task walk (STW), Alpha (cognitive interference), and dual-task walk (DTW). Functional near-infrared spectroscopy (fNIRS)-derived HbO2 in the prefrontal cortex (PFC) was used to quantify task-related changes in brain activation. Practice included three repeated counterbalanced trials for each task. Participants with FOF (n = 19; mean age = 79.84 ± 6.01 years; %female = 68.42) and without FOF (n = 56; mean age = 76.73 ± 6.39 years; %female = 44.64) were included. The presence of FOF was associated with slower stride velocity (estimate = − 12.354; p = 0.0154) and with greater increases in PFC HbO2 from STW to DTW (estimate = 0.303, p = 0.0009) and from Alpha to DTW (estimate = 0.387, p < 0.0001). Compared to controls, participants reporting FOF demonstrated an attenuated decline in PFC HbO2 from the first to the second DTW trials (estimate = 0.264; p = 0.0173). In contrast, compared to controls, participants with FOF demonstrated greater decline in Alpha PFC HbO2 from trial 1 to trial 2 (estimate = − 0.419, p < 0.0001) and from trial 1 to 3 (estimate = − 0.281, p = 0.0006). The change in PFC HbO2 over repeated STW trials was not significant and was not moderated by FOF status. The presence of FOF was associated with higher and inefficient PFC activation during DTW in older adults.
http://bit.ly/2WRShqv
Serotonin levels and 1-year mortality in patients with neuroendocrine tumors: a systematic review and meta-analysis
Future Oncology, Ahead of Print.
http://bit.ly/2RPWqaC
KEYNOTE-590: Phase III study of first-line chemotherapy with or without pembrolizumab for advanced esophageal cancer
Future Oncology, Ahead of Print.
http://bit.ly/2WR3lnS
Analysis of Genetic Diversity and Population Structure in Three Forest Musk Deer Captive Populations with Different Origins
Musk deer (Moschidae), whose secretion is an expensive and irreplaceable component of traditional medicine, have become endangered in the wild due to habitat fragmentation and over-exploitation. In recent years, China has had success in the artificial breeding of forest musk deer, thus relieving the pressure on wild populations. However, many farmed populations are experiencing degradation, and little genetic information is available for conservation management. In this study, we selected 274 individuals from three typical captive populations (originated from the Ta-pa Mountains (Tp), the midrange of the Qinling Mountains (Ql) and the Western Sichuan Plateau (WS), respectively) to evaluate the genetic variations. A total of more than 3.15 billion high-quality clean reads and 4.37 million high-quality SNPs were generated by RAD sequencing. Based on the analysis, we found that captive forest musk deer populations exhibit a relatively low level of genetic diversity. Ql displayed a higher level of genetic diversity than the Tp and WS populations. Tp and WS had experienced population bottlenecks in the past as inferred from the values of Tajima's D. There were high levels of heterozygote deficiency caused by inbreeding within the three populations. Population structure analysis suggested that the three populations have evolved independently, and a moderate amount of genetic differentiation has developed, although there was a low level of gene flow between the Ql and Tp populations. Furthermore, the average quantities of musk secreted by musk deer in the Tp and WS populations were significantly higher than that in the Ql population. The present genetic information should be considered in management plans for the conservation and utilization of musk deer from captive breeding.
http://bit.ly/2RPWiYE
Bidirectional Selection for Body Weight on Standing Genetic Variation in a Chicken Model
Experimental populations of model organisms provide valuable opportunities to unravel the genomic impact of selection in a controlled system. The Virginia body weight chicken lines represent a unique resource to investigate signatures of selection in a system where long-term, single-trait, bidirectional selection has been carried out for more than 60 generations. At 55 generations of divergent selection, earlier analyses of pooled genome resequencing data from these lines revealed that 14.2% of the genome showed extreme differentiation between the selected lines, contained within 395 genomic regions. Here, we report more detailed analyses of these data exploring the regions displaying within- and between-line genomic signatures of the bidirectional selection applied in these lines. Despite the strict selection regime for opposite extremes in body weight, this did not result in opposite genomic signatures between the lines. The lines often displayed a duality of the sweep signatures, where an extended region of homozygosity in one line, in contrast to mosaic pattern of heterozygosity in the other line. These haplotype mosaics consisted of short, distinct haploblocks of variable between-line divergence, likely the results of a complex demographic history involving bottlenecks, introgressions and moderate inbreeding. We demonstrate this using the example of complex haplotype mosaicism in the growth1 QTL. These mosaics represent the standing genetic variation available at the onset of selection in the founder population. Selection on standing genetic variation can thus result in different signatures depending on the intensity and direction of selection.
http://bit.ly/2WLTAY1
A Flexible Open-Source Decision Model for Value Assessment of Biologic Treatment for Rheumatoid Arthritis
Abstract
Objective
The nature of model-based cost-effectiveness analysis can lead to disputes in the scientific community. We propose an iterative and collaborative approach to model development by presenting a flexible open-source simulation model for rheumatoid arthritis (RA), accessible to both technical and non-technical end-users.
Methods
The RA model is a discrete-time individual patient simulation with 6-month cycles. Model input parameters were estimated based on currently available evidence and treatment effects were obtained with Bayesian network meta-analysis techniques. The model contains 384 possible model structures informed by previously published models. The model consists of the following components: (i) modifiable R and C++ source code available in a GitHub repository; (ii) an R package to run the model for custom analyses; (iii) detailed model documentation; (iv) a web-based user interface for full control over the model without the need to be well-versed in the programming languages; and (v) a general audience web-application allowing those who are not experts in modeling or health economics to interact with the model and contribute to value assessment discussions.
Results
A primary function of the initial version of RA model is to help understand and quantify the impact of parameter uncertainty (with probabilistic sensitivity analysis), structural uncertainty (with multiple competing model structures), the decision framework (cost-effectiveness analysis or multi-criteria decision analysis), and perspective (healthcare or limited societal) on estimates of value.
Conclusion
In order for a decision model to remain relevant over time it needs to evolve along with its supporting body of clinical evidence and scientific insight. Multiple clinical and methodological experts can modify or contribute to the RA model at any time due to its open-source nature.
http://bit.ly/2UVoFH5
A T-cell-engaging B7-H4/CD3 bispecific Fab-scFv antibody targets human breast cancer
Purpose: The B7 homolog 4 (B7-H4, VTCN1) is an immune checkpoint molecule that negatively regulates immune responses and is known to be overexpressed in many human cancers. Previously, we generated a mouse anti-human B7-H4 monoclonal antibody that did not have a significant antitumor effect in vivo probably because of molecule instability. In this study, we designed a B7-H4/CD3 bispecific antibody (BsAb) and investigated its antitumor activity in vitro and in vivo using a humanized mouse model. Experimental Design: Complementary DNAs of the antibody-binding fragment (Fab)-single-chain variable fragment (scFv) and scFv-scFv of the anti-B7-H4/CD3 BsAb were synthesized, and the BsAb antibodies were produced in HEK293 cells. The anti-tumor activity against human breast cancer cells by human peripheral blood mononuclear cells (hPBMC) with BsAb was measured by lactate dehydrogenase (LDH) release in vitro, and in vivo using hPBMC transplanted major histocompatibility (MHC) class I and class II-deficient NOG mice. Results: hPBMCs with anti-B7-H4/CD3 BsAbs successfully lysed the human breast cancer cell line MDA-MB-468 (EC50: 0.2 ng/ml) and other B7-H4-positive cell lines in vitro. When BsAb was injected in a humanized mouse model, there was an immediate and strong antitumor activity against MDA-MB-468, HCC-1954 and HCC-1569 tumors and CD8+ and granzyme B+ CTL infiltration into the tumor, and there were no adverse effects after long-term observation. CD8+ T cell depletion by an anti-CD8 antibody mostly reduced the antitumor effect of BsAb in vivo. Conclusions:An anti-B7-H4/CD3 bispecific antibody may be a good therapeutic tool for patients with B7-H4-positive breast cancers.
http://bit.ly/2GxZ5E3
Comprehensive genetic characterization of human thyroid cancer cell lines: a validated panel for preclinical studies
Purpose:Thyroid cancer cell lines are valuable models but have been neglected in pan-cancer genomic studies. Moreover, their misidentification has been a significant problem. We aim to provide a validated dataset for thyroid cancer researchers. Experimental Design:We performed next-generation sequencing and analyzed the transcriptome of 60 authenticated thyroid cell lines and compared our findings with the known genomic defects in human thyroid cancers. Results: Unsupervised transcriptomic analysis showed that 94% of thyroid cell lines clustered distinctly from other lineages. Thyroid cancer cell line mutations recapitulate those found in primary tumors (e.g., BRAF, RAS or gene fusions). Mutations in the TERT promoter (83%) and TP53 (71%) were highly prevalent. There were frequent alterations in PTEN, PIK3CA and of members of the SWI/SNF chromatin remodeling complex, mismatch repair, cell cycle checkpoint, histone methyl- and acetyltransferase functional groups. Copy number alterations (CNA) were more prevalent in cell lines derived from advanced vs. differentiated cancers, as reported in primary tumors, although the precise CNAs were only partially recapitulated. Transcriptomic analysis showed that all cell lines were profoundly dedifferentiated, regardless of their derivation, making them good models for advanced disease. However, they maintained the BRAFV600Evs. RAS-dependent consequences on MAPK transcriptional output, which correlated with differential sensitivity to MEK inhibitors. Paired primary tumor-cell line samples showed high concordance of mutations. Complete loss of p53 function in TP53 heterozygous tumors was the most prominent event selected during in vitro immortalization. Conclusions: This cell line resource will help inform future pre-clinical studies exploring tumor-specific dependencies.
http://bit.ly/2DYXF3u
Patient, Doctor Communication Priorities Differ in Ulcerative Colitis
FRIDAY, Feb. 8, 2019 -- There is discordance in communication priorities for patients with ulcerative colitis (UC) and their gastroenterology physicians (GIs), and the emotional impact of UC should not be underestimated, according to two studies...
http://bit.ly/2SJqDNi
Johnson & Johnson to Provide Drug Prices in TV Ads
FRIDAY, Feb. 8, 2019 -- In a drug industry first, Johnson & Johnson will start giving the list prices of its prescription drugs in television ads. The new policy will begin in late March with the popular blood thinner pill Xarelto, said Scott...
http://bit.ly/2MX1c5x
Predictors of Kidney Stone Recurrence Identified
FRIDAY, Feb. 8, 2019 -- A model has been developed for predicting recurrence among kidney stone formers, according to a study published in the February issue of the Mayo Clinic Proceedings. Lisa E. Vaughan, from the Mayo Clinic in Rochester,...
http://bit.ly/2Sz6zwZ
Walgreens Worst Violator in Tobacco Sales to Minors, FDA Says
FRIDAY, Feb. 8, 2019 -- Walgreens' high rate of violations for selling tobacco products to minors has led U.S. Food and Drug Administration Commissioner Scott Gottlieb, M.D., to ask for a meeting with the company to discuss the issue. In a statement...
http://bit.ly/2MX19Xp
Measles Outbreak Triggers Sharp Rise in Demand for Vaccine
FRIDAY, Feb. 8, 2019 -- Health clinics in Clark County, Washington, are scrambling to meet the sharply increased demand for measles vaccination as people seek protection during an outbreak of the highly contagious virus. State health department data...
http://bit.ly/2SCo4fF
Neutrophil-to-Lymphocyte Ratio; an Independent Predictor of Mortality or Just a Surrogate Marker of Underlying Complications?
We read with interest the recently published article by Rice et al1 illustrating the prognostic value of admission neutrophil-to-lymphocyte ratio (NLR) in patients with cirrhosis.
http://bit.ly/2tdiq5m
No Maintenance, No Gain in Long-term Treatment of Eosinophilic Esophagitis
Eosinophilic esophagitis (EoE) is a chronic allergen-induced/immune-mediated disease that has been rapidly increasing in incidence and prevalence and now accounts for substantial health care costs and utilization.1–3 The chronicity of EoE has been supported by a number of investigations, including a seminal natural history study by Straumann et al4 in which esophageal eosinophilia and dysphagia persisted in EoE patients over a mean follow-up period of more than 7 years without anti-inflammatory treatment.
http://bit.ly/2URv5a5
Information for Authors and Readers
Clinical Gastroenterology and Hepatology is the go-to resource on a broad spectrum of themes in clinical gastroenterology and hepatology. The official clinical practice journal of the AGA Institute brings you the best original research in the field with a unique combination of reviews, editorials, podcasts, video abstracts, and outcomes research—all supporting clinical practice. Articles on education, policy, and practice management highlight issues pertinent to clinicians.
http://bit.ly/2ta0Lf0
Clostridium difficile
Clostridium difficile is a bacterial infection of the intestine that may cause gut symptoms such as:
http://bit.ly/2UQPoo1
Reply
On behalf of our co-authors, we appreciate the interest of Macaluso et al1 regarding our study, "Low Risk of Pneumonia From Pneumocystis jirovecii Infection in Patients With Inflammatory Bowel Disease Receiving Immune Suppression,"2 and agree with their comment regarding the lack of consensus on which patients should receive primary prophylaxis against Pneumocystis jirovecii pneumonia (PJP). We also agree with their suggestion that PJP prophylaxis be considered in inflammatory bowel disease (IBD) patients treated with a calcineurin inhibitor and we also believe, as noted in our article, that patients on triple immunosuppression should be considered at higher risk.
http://bit.ly/2tbszQd
Issue Highlights
Although anti-thrombotic agents are a known risk factor for upper gastrointestinal (GI) bleeding, their impact on patient outcomes is unclear. In this issue of Clinical Gastroenterology and Hepatology, Dunne and colleagues1 reported results from a multi-center, multi-national prospective cohort study to assess the effect of anti-thrombotic agents on outcomes in patients with high-risk upper GI bleeding. The authors evaluated 568 patients with acute upper GI bleeding who underwent endoscopy between March 2014 and March 2015, of whom 44% used anti-thrombotic agents.
http://bit.ly/2UVnjvZ
Reply
We appreciate the interest by Karakonstantis et al in our article showing that NLR associates with mortality in hospitalized patients with cirrhosis.
http://bit.ly/2UNCp6r
Reply
We thank Drs Van Kruiningen and Sura for their letter and interest in the topic of granuloma detection in patients with Crohn's disease. We agree that our study had an overall lower rate of granuloma detection, but offer the following explanation for this difference with prior literature.
http://bit.ly/2tbsw6Z
Reply
We thank Drs Gracie and Ford for their interest in our recent article.1 We appreciate their comments and discussion of the recent data from the Inflammatory Bowel South-Eastern Norway study,2 highlighting both the clinical significance of functional gastrointestinal symptoms in inflammatory bowel disease (IBD) as well as the critical importance of investigating noninflammatory mechanisms in this patient population. Findings further raise the question of whether histologic remission is a sufficient therapeutic target in IBD patients with persistent symptoms.
http://bit.ly/2tbsuvT
Functional Gastrointestinal Symptoms in Inflammatory Bowel Disease: Rising to the Challenge
We read the recent article by Colombel et al1 with interest. We applaud the authors for drawing attention to the plight of patients with inflammatory bowel disease (IBD) who report ongoing symptoms in the absence of inflammation. Recently, the inflammatory bowel South-Eastern Norway study has highlighted that, even among patients with ulcerative colitis (UC) in deep histological remission, 1 in 3 may report these so-called functional symptoms.2 Whether such symptoms are due to genuine coexisting functional disease3 or not, they have a substantial impact on the quality of life and psychological health of patients.
http://bit.ly/2UTjaZr
Study Tests Targeted Drugs for Multiple Myeloma [News in Brief]
The MyDRUG trial matches patients with therapies based on tumor mutations.
http://bit.ly/2WRyM1d
Monophosphorylation Regulates Activities of RB during G1 [Research Watch]
Site-specific monophosphorylation of RB fine-tunes its regulation of multiple cellular activities.
http://bit.ly/2RLLz1u
Pharmacologic Inhibition of STK19 Impairs NRAS-Driven Melanoma [Research Watch]
Phosphorylation of oncogenic NRAS by STK19 promotes melanomagenesis.
http://bit.ly/2WOhT7v
Ibrutinib plus Palbociclib Has Efficacy in Mantle Cell Lymphoma [Research Watch]
The BTK inhibitor ibrutinib plus the CDK4 inhibitor palbociclib achieves responses in 67% of MCL patients.
http://bit.ly/2RQ9D3l
Targeting the interplay between metabolism and epigenetics in cancer
http://bit.ly/2Sz7kGl
Mosaicism, aging and cancer
http://bit.ly/2MXqGPZ
Immune checkpoint blockade for organ transplant patients with advanced cancer: how far can we go?
http://bit.ly/2SHdX9m
p53, stem cell biology and childhood blastomas
http://bit.ly/2MXqErl
Sunbeds and melanoma risk: time to close the debate
http://bit.ly/2N0u8cQ
Post-transcriptional regulations of cancer stem cell homeostasis
http://bit.ly/2SBwQux
New perspectives in Merkel cell carcinoma
http://bit.ly/2MYhESK
Chordoma: update on disease, epidemiology, biology and medical therapies
http://bit.ly/2SJy5Ih
A feasibility study of mediastinoscopic radical esophagectomy for thoracic esophageal cancer from the viewpoint of the dissected mediastinal lymph nodes validated with thoracoscopic procedure: a prospective clinical trial
Abstract
Purpose
A prospective trial evaluated the feasibility and safety of "mediastinoscopic esophagectomy with lymph node dissection" (MELD).
Methods
Eligible patients had thoracic esophageal squamous cell carcinoma, excluding T4, a bulky primary lesion or distant metastasis. Ten patients were enrolled and treated between September 2015 and March 2018. Additionally, to verify the integrity of the mediastinal lymph node dissection, thoracoscopic observation and lymph node dissection were followed. The primary end point was the integrity of mediastinal lymph node dissection. The secondary end points were the short-term outcomes, including mortality and morbidity.
Results
The median number of dissected lymph nodes in the upper mediastinal to cervical region and middle to lower mediastinal region by mediastinoscopy/thoracoscopy was 27/0.5 and 11.5/0, respectively. The median total operation time was 615 min, the median bleeding amount was 476 ml, and the median postoperative hospital stay was 15.5 days. Regarding complications of more than grade III according to the Clavien–Dindo classification, four had sputum excretion difficulty, one had pneumothorax and one had bilateral recurrent nerve palsy, but none required conversion to thoracotomy, and no operative deaths occurred.
Conclusion
Although the rate of recurrent nerve palsy still should be reduced, our mediastinoscopic lymphadenectomy technique is closely similar to radical esophagectomy.
http://bit.ly/2E1q358
Healthcare Utilization and Costs for Patients With End-stage Liver Disease are Significantly Higher at the End of Life Compared to Those of Other Decedents
Patients with end-stage liver disease (ESLD) have progressively complex medical needs. However, little is known about their end of life health care utilization or associated costs. We performed a population-based study to evaluate the end of life direct utilization and costs for patients with ESLD among health care sectors in the province of Ontario.
http://bit.ly/2Boh2RW
Colorectal Cancer in Individuals With Familial Adenomatous Polyposis, Based on Analysis of the Danish Polyposis Registry
Familial adenomatous polyposis (FAP) is an autosomal dominant disorder that increases risk for colorectal cancer (CRC). We assessed changes in the incidence and prevalence of CRC, and survival times, of patients with FAP participating in the Danish follow-up study.
http://bit.ly/2TFb1r7
American ancestry is a risk factor for suspected non-alcoholic fatty liver disease in Hispanic/Latino adults
Non-alcoholic fatty liver disease (NAFLD) disproportionally affects Hispanic/Latino populations. However, the magnitude varies among Hispanic/Latino ethnic groups. We investigated the mechanisms of these disparities.
http://bit.ly/2Bs7ipU
Association Between Severe Serum Alanine Aminotransferase Flares and Hepatitis B e Antigen Seroconversion and HBV DNA Decrease in Untreated Patients With Chronic HBV Infection
The incidence and outcomes of alanine aminotransferase (ALT) flares during the natural history of chronic HBV infection has not been determined in a large, racially heterogeneous groups of patients in North America.
http://bit.ly/2Bt6HnJ
Anaplastic Lymphoma Kinase (ALK)-positive Tumors: Clinical, Radiographic and Molecular Profiles, and Uncommon Sites of Metastases in Patients With Lung Adenocarcinoma
http://bit.ly/2SBixGi
Delays in palliative care referral among surgical patients: perspectives of surgical residents across the state of Michigan
Palliative care services (PCS) are underutilized and frequently delayed among surgical patients. Surgical residents often serve at the forefront for patient issues, including conducting conversations regarding prognosis and goals of care.
http://bit.ly/2SlND5e
Female Representation and Implicit Gender Bias at the 2017 American Society of Colon and Rectal Surgeons’ Annual Scientific and Tripartite Meeting
http://bit.ly/2N3amxr
Laparoscopic Mesorectal Excision in Obesity: Novel Insights and Technical Strategies
http://bit.ly/2MV66ji
Consequences of Increasing Complexity in Anorectal Surgery Performed at an Academic Center
http://bit.ly/2MV5XMM
Meta-analyses of Current Strategies to Treat Uncomplicated Diverticulitis
http://bit.ly/2SBh7vv
Robotic Transanal Minimally Invasive Surgery for the Excision of Rectal Neoplasia: Clinical Experience With 58 Consecutive Patients
http://bit.ly/2MVUD34
Influence of Anastomotic Leak After Elective Colorectal Cancer Resection on Survival and Local Recurrence: A Propensity Score Analysis
http://bit.ly/2SF0PSm
Is the Pathologic Response of T3 Rectal Cancer to High-Dose-Rate Endorectal Brachytherapy Comparable to External Beam Radiotherapy?
http://bit.ly/2N39skx
Medium- to Long-term Follow-up of Obstetric Anal Sphincter Injury
http://bit.ly/2MXR0K2
Comparison of Anal Versus Rectal Staging in the Prognostication of Rectal Squamous Cell Carcinoma: A Population-Based Analysis
http://bit.ly/2SAnIGC
System-Wide Improvement for Transitions After Ileostomy Surgery: Can Intensive Monitoring of Protocol Compliance Decrease Readmissions? A Randomized Trial
http://bit.ly/2N39TeF
Construct Validity and Responsiveness of the Abdominal Surgery Impact Scale in the Context of Recovery After Colorectal Surgery
http://bit.ly/2N39OHT
Profile of Consecutive Fecal Calprotectin Levels in the Perioperative Period and Its Predictive Capacity for Early Endoscopic Recurrence in Crohn’s Disease
http://bit.ly/2SEnm1s
Factors Related to Health Informatics Competencies for Nurses—Results of a National Electronic Health Record Survey
http://bit.ly/2tfjfuB
Neutropenic Enterocolitis in Critically Ill Patients: Spectrum of the Disease and Risk of Invasive Fungal Disease
http://bit.ly/2DqMM9s
Defining the Role Of Language in Infants' Object Categorization with Eye-tracking Paradigms
http://bit.ly/2E2i341
Functional Magnetic Resonance Spectroscopy at 7 T in the Rat Barrel Cortex During Whisker Activation
http://bit.ly/2SEc6Ce
Quantitative Examination of Antibiotic Susceptibility of Neisseria gonorrhoeae Aggregates Using ATP-utilization Commercial Assays and Live/Dead Staining
http://bit.ly/2MTNUGE
After Lung Cancer Screening, Follow-Up Procedures May Be Riskier than Thought
In everyday medical care, there may be more complications from invasive diagnostic procedures performed after lung cancer screening than has been reported in large studies.
http://bit.ly/2GxszSd
Using a Real-Time Locating System to Measure Walking Activity Associated with Wandering Behaviors Among Institutionalized Older Adults
http://bit.ly/2DmbMi1
Using Ustilago maydis as a Trojan Horse for In Situ Delivery of Maize Proteins
This work describes the cloning of an Ustilago maydis Trojan horse strain for the in situ delivery of secreted maize proteins into three different types of maize tissues.
http://bit.ly/2SlU6NQ
EZH2 inhibitor GSK126 suppresses anti-tumor immunity by driving production of myeloid-derived suppressor cells
Enhancer of Zeste homolog (EZH2) is a key epigenetic regulator of gene expression and is frequently overexpressed in various cancer types, suggesting a role in oncogenesis. The therapeutic potential of EZH2 inhibitors is currently being explored, but their effect on anti-tumor immunity is largely unknown. Here we report that suppressing EZH2 activity using EZH2 inhibitor GSK126 resulted in increased numbers of myeloid-derived suppressor cells (MDSC) and fewer CD4+ and IFN-γ+CD8+ T cells, which are involved in anti-tumor immunity. Addition of a neutralizing antibody against the myeloid differentiation antigen GR-1 or gemcitabine/5-fluorouracil (5Fu) depleted MDSCs, alleviated MDSC-mediated immunosuppression and increased CD4+ and CD8+ T cell tumor infiltration and GSK126 therapeutic efficacy. Mechanistically, we identified a novel pathway of MDSC production in cancer in which EZH2 inhibition directs myeloid differentiation from primitive hematopoietic progenitor cells. These findings suggest that modulating the tumor immune microenvironment may improve the efficacy of EZH2 inhibitors.
http://bit.ly/2UMPzR6
Tumor suppressor microRNA-204-5p regulates growth, metastasis, and immune microenvironment remodeling in breast cancer
Various microRNAs (miRNAs) play critical roles in the development and progression of solid tumors. In this study, we describe the role of miR-204-5p in limiting growth and progression of breast cancer. In breast cancer tissues, miR-204-5p was significantly downregulated compared to normal breast tissues, and its expression levels were associated with increased survival outcome in breast cancer patients. Overexpression of miR-204-5p inhibited viability, proliferation, and migration capacity in human and murine breast cancer cells. Additionally, miR-204-5p overexpression resulted in a significant alteration in metabolic properties of cancer cells and suppression of tumor growth and metastasis in mouse breast cancer models. The association between miR-204-5p expression and clinical outcomes of breast cancer patients showed a non-linear pattern that was reproduced in experimental assays of cancer cell behavior and metastatic capacities. Transcriptome and proteomic analysis revealed that various cancer-related pathways including PI3K/Akt and tumor immune interactions were significantly associated with miR-204-5p expression. PIK3CB, a major regulator of PI3K/Akt pathway, was a direct target for miR-204-5p, and the association between PIK3CB-related PI3K/Akt signaling and miR-204-5p was most evident in the basal subtype. The sensitivity of breast cancer cells to various anti-cancer drugs including PIK3CB inhibitors was significantly affected by miR-204-5p expression. Additionally, miR-204-5p regulated expression of key cytokines in tumor cells and reprogrammed the immune microenvironment by shifting myeloid and lymphocyte populations. These data demonstrate both cell-autonomous and non-cell-autonomous impacts of tumor suppressor miR-204-5p in breast cancer progression and metastasis.
http://bit.ly/2UNmKUM
Upregulation of PD-L1 via HMGB1-activated IRF3 and NF-kB contributes to UV radiation-induced immune suppression
Solar ultraviolet radiation (UVR) suppresses skin immunity, which facilitates initiation of skin lesions and establishment of tumors by promoting immune evasion. It is unclear whether immune checkpoints are involved in the modulation of skin immunity by UVR. Here we report that UVR exposure significantly increased expression of immune checkpoint molecule PD-L1 in melanoma cells. The damage-associated molecular patterns molecule HMGB1 was secreted by melanocytes and keratinocytes upon UVR, which subsequently activated the receptor for advanced glycation endproducts (RAGE) receptor to promote NF-kB- and IRF3-dependent transcription of PD-L1 in melanocytes. UVR exposure significantly reduced the susceptibility of melanoma cells to CD8+ T cell-dependent cytotoxicity, which was mitigated by inhibiting the HMGB1/TBK1/IRF3/NF-kB cascade or by blocking the PD-1/PD-L1 checkpoint. Taken together, our findings demonstrate that UVR-induced upregulation of PD-L1 contributes to immune suppression in the skin microenvironment, which may promote immune evasion of oncogenic cells and drive melanoma initiation and progression.
http://bit.ly/2tdaRfd
Epithelial-to-mesenchymal transition is a mechanism of ALK inhibitor resistance in lung cancer independent of ALK mutation status
Mutations in the ALK gene are detectable in ~40% of ALK-rearranged lung cancers resistant to ALK inhibitors. While epithelial-to-mesenchymal transition (EMT) is a mechanism of resistance to various targeted drugs, its involvement in ALK-inhibitor resistance is largely unknown. In this study, we report that both ALK mutant L1196M and EMT were concomitantly detected in a single crizotinib-resistant lesion in an ALK-rearranged lung cancer patient. Digital PCR analyses combined with microdissection after immunohistochemical staining for EMT markers revealed that ALK L1196M was predominantly detected in epithelial type tumor cells, indicating that mesenchymal phenotype and ALK mutation can coexist as independent mechanisms underlying ALK inhibitor-resistant cancers. Preclinical experiments with crizotinib-resistant lung cancer cells showed that EMT associated with decreased expression of miR-200c and increased expression of ZEB1 caused cross-resistance to new generation ALK inhibitors alectinib, ceritinib, and lorlatinib. Pre-treatment with the histone deacetylase (HDAC) inhibitor quisinostat overcame this resistance by reverting EMT in vitro and in vivo. These findings indicate that HDAC inhibitor pre-treatment followed by a new ALK inhibitors may be useful to circumvent resistance constituted by coexistence of resistance mutations and EMT in the heterogeneous tumor.
http://bit.ly/2t9pBf0
Delayed EMS Response Time Tied to Mortality After Car Accident
FRIDAY, Feb. 8, 2019 -- Longer emergency medical service (EMS) response times are associated with higher rates of motor vehicle crash (MVC) mortality, according to a study published online Feb. 6 in JAMA Surgery. James P. Byrne, M.D., Ph.D., from...
http://bit.ly/2GuB0Oa
Slower Gait Speed, Shorter Step Length Tied to Later Depression
FRIDAY, Feb. 8, 2019 -- Older people who develop depression have significantly slower gait speed and shorter step length several years before diagnosis, according to a study published online Feb. 5 in the Journal of the American Geriatrics...
http://bit.ly/2E0LmnC
Diagnostic Delays Common in Inflammatory Bowel Disease
FRIDAY, Feb. 8, 2019 -- Diagnostic delays are common in inflammatory bowel disease, with 68 percent of patients reporting a delay in diagnosis, according to a study presented at the 2019 Crohn's & Colitis Congress, held from Feb. 7 to 9 in Las...
http://bit.ly/2Gvn32B
Education Not Tied to Rate of Cognitive Change in Seniors
FRIDAY, Feb. 8, 2019 -- Education is associated with global cognition but not with the rate of cognitive change in older adults, according to a study published online Feb. 6 in Neurology. Robert S. Wilson, Ph.D., from the Rush University Medical...
http://bit.ly/2E1m6gT
Misuse of Rx Opioids Linked to Other High-Risk Behaviors
FRIDAY, Feb. 8, 2019 -- Misuse of prescribed opioids is associated with other high-risk drug behaviors, according to a study published online Feb. 5 in Pharmacoepidemiology & Drug Safety. Ramin Mojtabai, M.D., Ph.D., M.P.H., from Johns Hopkins...
http://bit.ly/2E25qG9
Vaccine-Preventable Infections Common After Peds Transplant
FRIDAY, Feb. 8, 2019 -- Hospitalization for vaccine-preventable infections occurs in more than 15 percent of pediatric solid organ transplant recipients in the first five years after surgery, according to a study recently published in JAMA...
http://bit.ly/2GD9uyn
Country-Specific Norms Created for Cancer-Related Quality of Life
FRIDAY, Feb. 8, 2019 -- Country-specific norms have been established for the European Organisation for Research and Treatment of Cancer (EORTC) questionnaire to measure the self-reported quality of life of cancer patients, according to a study...
http://bit.ly/2E0lBUo
Certain Opioids Less Effective With SSRI Antidepressants
FRIDAY, Feb. 8, 2019 -- Certain opioids are less effective for postoperative pain in patients taking selective serotonin reuptake inhibitor (SSRI) antidepressants, according to a study published online Feb. 6 in PLOS ONE. Arjun Parthipan, from...
http://bit.ly/2GyhPDq
High-Risk HPV Infection Linked to Increased Risk for CVD in Women
FRIDAY, Feb. 8, 2019 -- High-risk human papillomavirus (HPV) infection is associated with an increased risk for developing cardiovascular disease (CVD), according to a study published online Feb. 7 in Circulation Research. Eun-Jeong Joo, M.D.,...
http://bit.ly/2E1DJxc
Cancers, Vol. 11, Pages 199: Identification of Cross Talk between FoxM1 and RASSF1A as a Therapeutic Target of Colon Cancer
Cancers, Vol. 11, Pages 199: Identification of Cross Talk between FoxM1 and RASSF1A as a Therapeutic Target of Colon Cancer
Cancers doi: 10.3390/cancers11020199
Authors: Blanchard Czinn Banerjee Sharda Bafford Mubariz Morozov Passaniti Ahmed Banerjee
Metastatic colorectal cancer (mCRC) is characterized by the expression of cellular oncogenes, the loss of tumor suppressor gene function. Therefore, identifying integrated signaling between onco-suppressor genes may facilitate the development of effective therapy for mCRC. To investigate these pathways we utilized cell lines and patient derived organoid models for analysis of gene/protein expression, gene silencing, overexpression, and immunohistochemical analyses. An inverse relationship in expression of oncogenic FoxM1 and tumor suppressor RASSF1A was observed in various stages of CRC. This inverse correlation was also observed in mCRC cells lines (T84, Colo 205) treated with Akt inhibitor. Inhibition of FoxM1 expression in mCRC cells as well as in our ex vivo model resulted in increased RASSF1A expression. Reduced levels of RASSF1A expression were found in normal cells (RWPE-1, HBEpc, MCF10A, EC) stimulated with exogenous VEGF165. Downregulation of FoxM1 also coincided with increased YAP phosphorylation, indicative of tumor suppression. Conversely, downregulation of RASSF1A coincided with FoxM1 overexpression. These studies have identified for the first time an integrated signaling pathway between FoxM1 and RASSF1A in mCRC progression, which may facilitate the development of novel therapeutic options for advanced colon cancer therapy.
http://bit.ly/2DkqXIj
An Immunohistopathologic Study to Profile the Folate Receptor Beta Macrophage and Vascular Immune Microenvironment in Giant Cell Arteritis
The protocol illustrates the use of histopathologic examination and immunohistochemistry to profile the folate receptor beta macrophage and its relationship with the total immune cell infiltrate in temporal artery biopsies in giant cell arteritis.
http://bit.ly/2E1B2vA
Eukaryotic elongation factor 2 (eEF2) kinase/eEF2 plays protective roles against glucose deprivation-induced cell death in H9c2 cardiomyoblasts
Abstract
During the development of cardiac hypertrophy, glucose deprivation (GD) associated with coronary microvascular rarefaction is caused, leading to cardiomyocyte death. Phosphorylation (inactivation) of eukaryotic elongation factor 2 (eEF2) by eEF2 kinase (eEF2K) inhibits protein translation, a highly energy consuming process, which plays protective roles against nutrient deprivation-induced cell death. We previously showed that eEF2 phosphorylation was increased in isolated heart from several cardiac hypertrophy models. In this study, we investigated whether eEF2K/eEF2 mediates the inhibition of cardiomyocyte death under GD condition. In H9c2 rat cardiomyoblasts cultured with serum-free medium, GD significantly augmented eEF2 phosphorylation and signals related to autophagy [increase of microtubule-associated protein 1 light chain 3 (LC3)-II to LC3-I ratio] and apoptosis (cleavage of caspase-3) as determined by Western blotting. GD induced cell death, which was augmented by eEF2K gene knockdown using a small interfering RNA. eEF2K gene knockdown significantly augmented GD-induced cleavage of caspase-3 and apoptotic nuclear condensation as determined by 4′, 6-diamidino-2-phenylindole staining. In contrast, eEF2K gene knockdown significantly inhibited GD-induced increase of LC3-II to LC3-I ratio and autophagosome formation as determined by an immunofluorescence staining. An inhibitor of autophagy, 3-methyladenine or bafilomycin A1 significantly augmented GD-induced cleavage of caspase-3. Further, eEF2K gene knockdown significantly inhibited GD-induced phosphorylation of adenosine monophosphate-activated protein kinase (AMPK)α and its downstream substrate, unc-51 like autophagy activating kinase (ULK)1. An inhibitor of AMPK, dorsomorphin significantly inhibited GD-induced increase of LC3-II to LC3-I ratio. In conclusion, we for the first time revealed that eEF2K/eEF2 axis under GD condition mediates the inhibition of apoptotic H9c2 cell death at least in part via promotion of autophagy through AMPKα/ULK1 signaling pathway.
http://bit.ly/2tg27og
Stromal fibronectin expression in patients with resected pancreatic ductal adenocarcinoma
Abstract
Background
Pancreatic ductal adenocarcinoma (PDAC) is characterized by an extremely dense stroma, which has a fundamental role in tumor progression. Fibronectin (FN1) is the main constituent of the tumor stroma in pancreatic cancer. This study aimed to explore the association between FN1 and clinicopathological characteristics and disease survival.
Methods
Formalin-fixed paraffin-embedded tissue samples from 138 patients with PDAC were constructed into a tissue microarray, followed by immunohistochemical analysis with a recombinant monoclonal FN1 antibody. Chi-square test or Fisher's exact test were used for comparison of FN1 expression and relevant clinicopathological parameters. Kaplan-Meier survival curves and Cox regression analyses were used to assess the association between FN1 and survival.
Results
FN1 was detected in the stromal compartment in most cases (117/138, 84.8%). Compared to the low FN1 expression group, the high FN1 expression group had significantly larger tumor size (P = 0.002), more advanced T stage (P = 0.039) and N stage (P = 0.009), and also worse AJCC stage (P = 0.003). However, stromal FN1 expression was not associated with disease-free survival or overall survival.
Conclusions
This study suggests that high stromal FN1 expression is associated with aggressive tumor characteristics in patients with resected PDAC. However, no association between FN1 expression and survival was found.
http://bit.ly/2MU2E8x
Primary renal well-differentiated neuroendocrine tumors: report of six cases with an emphasis on the Ki-67 index and mitosis
Primary renal well-differentiated neuroendocrine tumors (WDNETs) also called carcinoid and atypical carcinoid are extremely rare, and little is known about parameters that may predict prognosis at diagnosis.
http://bit.ly/2Shbhjm
Dosimetric predictors of temporal lobe injury after intensity-modulated radiotherapy for T4 nasopharyngeal carcinoma: a competing risk study
Abstract
Background
In patients with T4 nasopharyngeal carcinoma (NPC), death may occur prior to the occurrence of temporal lobe injury (TLI). Because such competing risk death precludes the occurrence of TLI and thus the competing risk analysis should be applied to TLI research. The aim was to investigate the incidence and predictive factors of TLI after intensity-modulated radiotherapy (IMRT) among T4 NPC patients.
Methods
From March 2008 to December 2014, T4 NPC patients treated with full-course radical IMRT at our center were reviewed retrospectively. A nested case-control study was designed for this cohort of patients. The cases were patients with TLI diagnosed by MRI during the follow-up period, and the controls were patients without TLI after IMRT matched 1:1 to each case by gender, age at diagnosis, intercranial involvement, and follow-up time. The end point was time to TLI or death without prior TLI. We analyzed the cumulative incidence function (CIF) and performed a competing risk regression model to identify the predictors of TLI.
Results
With a median follow-up of 40.1 months, 63 patients (63/506, 12.5%) developed TLI as diagnosed by MRI, and 136 deaths occurred during the period. The cumulative incidence of TLI at 5 years was 13.2%, while 26.7% died without prior TLI. The univariate analysis showed that all selected dosimetric parameters were associated with the occurrence of TLI. On multivariate analysis, D1cc and V20 remained statistically significant. Based on the area-under-the-curve (AUC) values, D1cc was considered the most predictive. The patients with D1cc > 71.14 Gy had a 7.920-fold increased risk of TLI compared with those with D1cc ≤71.14 Gy (P < 0.05). Similarly, V20 > 42.22 cc was found to result in a statistically significant higher risk of TLI (subdistribution hazard ratio [sHR] =3.123, P < 0.05).
Conclusions
TL D1cc and V20 were predictive of TLI after IMRT for T4 NPC. They should be considered as first and second priorities of dose constraints of the TL. D1cc ≤71.14 Gy and V20 ≤ 42.22 cc could be useful dose-volume constraints for reducing the occurrence of TLI during IMRT treatment planning without obviously compromising the tumor coverage.
http://bit.ly/2DZOe40
FUS/circ_002136/miR-138-5p/SOX13 feedback loop regulates angiogenesis in Glioma
Abstract
Background
Angiogenesis plays a critical role in the progression of glioma. Previous studies have indicated that RNA-binding proteins (RBPs) interact with RNAs and participate in the regulation of the malignant behaviors of tumors. As a type of endogenous non-coding RNAs, circular RNAs (circRNAs) are abnormally expressed in various cancers and are involved in diverse tumorigeneses including angiogenesis.
Methods
The expression levels of FUS, circ_002136, miR-138-5p, SOX13, and SPON2 were determined using quantitative real-time PCR (qRT-PCR) and western blot. Transient cell transfection was performed using the Lipofectamine 3000 reagent. The RNA-binding protein immunoprecipitation (RNA-IP) and the RNA pull-down assays were used to detect the interaction between FUS and circ_002136. The dual-luciferase reporter assay system was performed to detect the binding sites of circ_002136 and miR-138-5p, miR-138-5p and SOX13. The chromatin immunoprecipitation (ChIP) assays were used to examine the interactions between transcription factor SOX13 and its target proteins .
Results
We demonstrated that down-regulation of FUS or circ_002136 dramatically inhibited the viability, migration and tube formation of U87 glioma-exposed endothelial cells (GECs). MiR-138-5p was down-regulated in GECs and circ_002136 functionally targeted miR-138-5p in an RNA-induced silencing complex (RISC). Inhibition of circ_002136, combined with the restoration of miR-138-5p, robustly reduced the angiogenesis of GECs. As a target gene of miR-138-5p, SOX13 was overexpressed in GECs and was proved to be involved in circ_002136 and miR-138-5p-mediated angiogenesis in gliomas. In addition, we found that SOX13 was directly associated with and activated the SPON2 promoter, thereby up-regulating the expression of SPON2 at the transcriptional level. Knockdown of SPON2 suppressed the angiogenesis in GECs. More important, SOX13 activated the FUS promoter and increased its expression, forming a feedback loop.
Conclusion
Our data suggests that the feedback loop of FUS/circ_002136/miR-138-5p/SOX13 played a crucial role in the regulation of angiogenesis in glioma. This also provides a potential target and an alternative strategy for combined glioma therapy.
http://bit.ly/2I036n4
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Αλέξανδρος Γ. Σφακιανάκης Medicine by Alexandros G. Sfakianakis,Anapafseos 5 Agios Nikolaos 72100 Crete Greece,00302841026182,0030693260717...
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heory of COVID-19 pathogenesis Publication date: November 2020Source: Medical Hypotheses, Volume 144Author(s): Yuichiro J. Suzuki ScienceD...
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