Inferring Arthropod Phylogeny: Fossils and their Interaction with Other Data Sources

Abstract

The past five years have witnessed a renewed interest in discrete morphological characters as a source of phylogenetic data, after a decade or more of their dismissal in favor of molecules-only approaches. This has stemmed in large part from refinements in total evidence dating, which requires morphological character matrices for extinct and extant taxa as well as temporal data from fossils. The unique contribution of palaeontology is stem groups, revealing the sequence of character acquisition in long-branch terminals and otherwise unknown character combinations and/or character states in extinct phenotypes. The origin of mandibles exemplifies an integrative approach to analyzing the origin of a complex phenotypic feature using molecular, anatomical, and palaeontological data: (1) transcriptomics defends a single origin of mandibles in the clade Mandibulata; (2) Cambrian fossils inform on morphological changes in the gnathal appendages in the mandibulate stem group; (3) molecular dating, calibrated by fossils in novel modes of exceptional preservation, draws the mandibulate crown group into the early Cambrian and constrains the timing of character evolution; and (4) functional studies in extant taxa identify genes that specify mandibular identity from a maxilla and, ultimately, a trunk limb-like precursor, as predicted by the serial similarity of these appendages in Cambrian stem-group fossils.

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